pyiron.atomistics.master.serial module¶
-
class
pyiron.atomistics.master.serial.
SerialMaster
(project, job_name)[source]¶ Bases:
pyiron.base.master.serial.SerialMasterBase
,pyiron.atomistics.job.atomistic.AtomisticGenericJob
The serial master class is a metajob consisting of a dynamic list of jobs which are executed in serial mode. The job is derived from the GenericMaster.
- Parameters
project (ProjectHDFio) – ProjectHDFio instance which points to the HDF5 file the job is stored in
job_name (str) – name of the job, which has to be unique within the project
-
.. attribute:: job_name
name of the job, which has to be unique within the project
-
.. attribute:: status
- execution status of the job, can be one of the following [initialized, appended, created, submitted, running,
aborted, collect, suspended, refresh, busy, finished]
-
.. attribute:: job_id
unique id to identify the job in the pyiron database
-
.. attribute:: parent_id
job id of the predecessor job - the job which was executed before the current one in the current job series
-
.. attribute:: master_id
job id of the master job - a meta job which groups a series of jobs, which are executed either in parallel or in serial.
-
.. attribute:: child_ids
list of child job ids - only meta jobs have child jobs - jobs which list the meta job as their master
-
.. attribute:: project
Project instance the jobs is located in
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.. attribute:: project_hdf5
ProjectHDFio instance which points to the HDF5 file the job is stored in
-
.. attribute:: job_info_str
short string to describe the job by it is job_name and job ID - mainly used for logging
-
.. attribute:: working_directory
working directory of the job is executed in - outside the HDF5 file
-
.. attribute:: path
path to the job as a combination of absolute file system path and path within the HDF5 file.
-
.. attribute:: version
Version of the hamiltonian, which is also the version of the executable unless a custom executable is used.
-
.. attribute:: executable
Executable used to run the job - usually the path to an external executable.
-
.. attribute:: library_activated
For job types which offer a Python library pyiron can use the python library instead of an external executable.
-
.. attribute:: server
Server object to handle the execution environment for the job.
-
.. attribute:: queue_id
the ID returned from the queuing system - it is most likely not the same as the job ID.
-
.. attribute:: logger
logger object to monitor the external execution and internal pyiron warnings.
-
.. attribute:: restart_file_list
list of files which are used to restart the calculation from these files.
-
.. attribute:: job_type
- Job type object with all the available job types: [‘ExampleJob’, ‘SerialMaster’, ‘ParallelMaster’, ‘ScriptJob’,
‘ListMaster’]
-
.. attribute:: child_names
Dictionary matching the child ID to the child job name.
-
.. attribute:: start_job
The first job of the series.
-
.. attribute:: input
The input of the start job - the first job of the series.
-
property
structure
¶ Returns: